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1. molview.orgMolView

   molview.org

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   Calculations. MEP surface lucent/opaque: calculates and projects molecular electrostatic potential on a translucent or opaque van der Waals surface. Charge: calculates and projects atomic charge as text label and white to atom color gradient. Bond dipoles: calculates and draws individual bond dipoles.

2. electronorbitalsimulator.comElectron Orbital Simulator

   electronorbitalsimulator.com

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   The electron orbital simulator (EOS) is a Unity program that serves as a visual aid for learning the structure of the atom. On the left is a 3D model of the atom selected in the periodic table.

3. www.chemdoodle.comChemDoodle | Chemical Drawing Software

   www.chemdoodle.com

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   Quickly define atom-to-atom mappings for your reactions, and ChemDoodle will help check your work. Input and output of reaction atom-to-atom mapping is fully supported in ChemDoodle Documents, ChemDoodle JSON, ChemDraw CDX and CDXML, SMILES, and MDL RXN files.

4. www.chemdoodle.com › 3dChemDoodle 3D | Molecular Modeling and Graphics Software

   www.chemdoodle.com › 3d

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   ChemDoodle 3D can generate a number of surface types and color functions for any number of atoms. Visualize the space of your structures in ways other editors cannot. You can customize mesh algorithms, display types, normals, colors and more.

5. www.builder.molview.orgMolecule Builder

   www.builder.molview.org

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   3D Molecule Builder. Center molecule. Start from scratch. Select tool. Add atom. Remove atom. Select element. Select bond count.

6. mattermodeling.stackexchange.com › questions › 467What are the freely available crystal-structure visualization...

   mattermodeling.stackexchange.com › questions › 467

   9 Μαρ 2021 · Beautiful Atoms. Beautiful Atoms is a Python package for editing and rendering atoms and molecules objects using Blender. A Python interface that allows for automating workflows. Features: Model: space-filling, ball-stick, polyhedral, cavity and so on. Support file: cif, xyz, cube, pdb, json, VASP-out and so on. Support structure from ASE and ...

7. phet.colorado.edu › en › simulationMolecule Shapes - VSEPR | Lone Pairs - Lone Pairs | Bonds - PhET...

   phet.colorado.edu › en › simulation

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   Explore molecule shapes by building molecules in 3D! How does molecule shape change with different numbers of bonds and electron pairs? Find out by adding single, double or triple bonds and lone pairs to the central atom. Then, compare the model to real molecules!