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info(freqs) [1] 0.940286. As a matter of improving your code, you can simplify this dramatically as you don't need a loop if you are provided a vector of class frequencies. For example: # calculate shannon-entropy. -sum(freqs * log2(freqs)) [1] 0.940286.
7 Φεβ 2016 · when I calculate entropy for attribute B the result give me NaN that is due to zero (0) (log2 (0) is error ) . in such situation how can I fix this error or how can make H1 give me zero instead of NaN. ifelse(is.na(entropy), 0, entropy) should work. There is a package called 'entropy' in r if it works for you.
The entropy function allows to estimate entropy from observed counts by a variety of methods: method="ML":maximum likelihood, see entropy.empirical. method="MM":bias-corrected maximum likelihood, see entropy.MillerMadow. method="Jeffreys": entropy.Dirichlet with a=1/2. method="Laplace": entropy.Dirichlet with a=1.
v = c(0,4,3,6,7,3,2,3,4,5) entropy(discretize(v, numBins = 8, r = c(0,7))) and I get. [1] 1.834372. jolly good. Now, the question is: assuming that the following is the algorithm used to calculate the entropy – taken from Wikipedia.
30 Δεκ 2015 · EntropyExplorer is an R package for calculating DSE, DCV and DE. It also computes corresponding p values for each metric. All features are available through a single R function call. Based on extensive investigations in the literature, the Fligner-Killeen test was chosen to compute DCV p values.
13 Δεκ 2019 · Pracma has two functions for computing entropy: sample_entropy for calculating sample entropy and approx_entropy for approximate entropy. This package is designed for numerical analysis and calculation of linear equations.
7 Μαρ 2015 · I am trying to compute entropy for every column and then will just average it out over all the columns. While going through different R packages I found that most of them discretize the continuous data and then compute the entropy.
