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1. blast.ncbi.nlm.nih.gov › BlastNucleotide BLAST: Search nucleotide databases using a nucleotide...

   blast.ncbi.nlm.nih.gov › Blast

   • Αποθηκευμένο αντίγραφο

   Title: Core nucleotide BLAST database. Description: The core nucleotide BLAST database consists of GenBank+EMBL+DDBJ+PDB+RefSeq sequences, but excludes EST, STS, GSS, WGS, TSA, patent sequences as well as phase 0, 1, and 2 HTGS sequences and most eukaryotic chromosome sequences. The database is non-redundant.

   • Blastx

     The Basic Local Alignment Search Tool (BLAST) finds regions...

   • Nucleotide

     The Nucleotide database is a collection of sequences from...

   • GenBank

     Search GenBank for sequence identifiers and annotations with...

   • Blast

     The Basic Local Alignment Search Tool (BLAST) finds regions...

2. blast.ncbi.nlm.nih.gov › BlastBasic Local Alignment Search Tool - BLAST

   blast.ncbi.nlm.nih.gov › Blast

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   The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences. The program compares nucleotide or protein sequences to sequence databases and calculates the statistical significance of matches.

3. www.ncbi.nlm.nih.gov › nuccoreHome - Nucleotide - NCBI

   www.ncbi.nlm.nih.gov › nuccore

   The Nucleotide database is a collection of sequences from several sources, including GenBank, RefSeq, TPA and PDB. Genome, gene and transcript sequence data provide the foundation for biomedical research and discovery.

4. www.ncbi.nlm.nih.gov › genbankGenBank Overview - National Center for Biotechnology Information

   www.ncbi.nlm.nih.gov › genbank

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   8 Δεκ 2022 · Search GenBank for sequence identifiers and annotations with Entrez Nucleotide. Search and align GenBank sequences to a query sequence using BLAST (Basic Local Alignment Search Tool). See BLAST info for more information about the numerous BLAST databases.

5. www.ncbi.nlm.nih.gov › books › NBK1734BLAST QuickStart - Comparative Genomics - NCBI Bookshelf

   www.ncbi.nlm.nih.gov › books › NBK1734

   The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between protein or nucleotide sequences. The program compares nucleotide or protein sequences to sequence in a database and calculates the statistical significance of the matches.

6. blast.ncbi.nlm.nih.gov › BLAST_guideBLAST Basic Local Alignment Search Tool

   blast.ncbi.nlm.nih.gov › BLAST_guide

   To discuss effective BLAST program selection, we first need to know what databases are available and what sequences these databases contain. In this section, we will first take a look at the common BLAST databases. According to their content, they are grouped into nucleotide and protein databases.

7. support.nlm.nih.gov › knowledgebase › articleHow do I use Nucleotide BLAST (blastn) to determine the coding...

   support.nlm.nih.gov › knowledgebase › article

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   Nucleotide BLAST (blastn) can help you find coding regions (CDS) on your sequence. You can utilize the CDS feature display on the BLAST search results page. See the article on blastn and CDS feature set up. This article deals with finding CDS locations on sequences from prokaryotic genomes.