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  1. The Nucleotide database is a collection of sequences from several sources, including GenBank, RefSeq, TPA and PDB. Genome, gene and transcript sequence data provide the foundation for biomedical research and discovery.

    • Blast

      The Basic Local Alignment Search Tool (BLAST) finds regions...

  2. 8 Δεκ 2022 · Search GenBank for sequence identifiers and annotations with Entrez Nucleotide. Search and align GenBank sequences to a query sequence using BLAST (Basic Local Alignment Search Tool). See BLAST info for more information about the numerous BLAST databases.

  3. You can use Entrez query syntax to search a subset of the selected BLAST database. This can be helpful to limit searches to molecule types, sequence lengths or to exclude organisms. more...

  4. Entrez covers over 20 databases including the complete protein sequence data from PIR-International, PRF, Swiss-Prot, and PDB and nucleotide sequence data from GenBank that includes information from EMBL and DDBJ.

  5. The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences. The program compares nucleotide or protein sequences to sequence databases and calculates the statistical significance of matches.

  6. The GenBank (Benson et al., 2013) is the nucleotide sequence database managed by the National Institute of Health. The present version of GenBank (240, October 2020) contains 219,055,207 sequences. GenBank is an annotated collection of all publicly available DNA sequences.

  7. 5 Ιαν 2024 · GenBank® (https://www.ncbi.nlm.nih.gov/genbank/) is a comprehensive, public database that contains 25 trillion base pairs from over 3.7 billion nucleotide sequences for 557 000 formally described species.

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