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The RNAfold web server will predict secondary structures of single stranded RNA or DNA sequences. Current limits are 7,500 nt for partition function calculations and 10,000 nt for minimum free energy only predicitions.
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20 ώρες πριν · The PCC is calculated against the RNA-seq signal in the epithelial data and is labelled (top right). The shown predicted tracks are in 1,024 bins. ... Evolutionary constraints assessed by in ...
18 Μαρ 2022 · Here we perform long-term evolution experiments of RNA that replicates using a self-encoded RNA replicase. The RNA diversifies into multiple coexisting host and parasite lineages, whose...
We can calculate the mutual information content for two different RNAs and compare it. In other words, you compare the probabilities of two base pair structures agreeing randomly vs. if they have evolved to be conserve the structure.
24 Σεπ 2021 · Here, we evolve 16S ribosomal RNAs (rRNAs) from Escherichia coli, Pseudomonas aeruginosa, and Vibrio cholerae towards enhanced protein synthesis rates.
To date, transcriptional studies on aging using RNASeq data from different human tissues is limited. The aim of this package is to provide a tool for across-tissue and tissue-specific transcriptional age calculation based on GTEx RNASeq data. Author: Xu Ren [aut, cre], Pei Fen Kuan [aut] Maintainer: Xu Ren <xuren2120 at gmail.com>
