Yahoo Αναζήτηση Διαδυκτίου

Αποτελέσματα Αναζήτησης

1. www.sciencedirect.com › science › articleRNA structure and dynamics: A base pairing perspective

   www.sciencedirect.com › science › article

   1 Νοε 2013 · According to the study of Leontis and Westhof, there can be 12 basic types of base pairing geometries possible in RNA structures, considering three distinct base pairing edges of each nucleotide (W, H, S) and two different orientations about the axis of interactions (cis and trans) – cis Watson–Crick/Watson–Crick (W:WC), trans Watson ...

   • A Base Pairing Perspective

     RNA is now known to possess various structural, regulatory...

   • View Article

     Most of the contacts that stabilize internal domain...

   • Molecular Dynamics of The Frame-Shifting Pseudoknot From Beet Western Yellows Virus

     The 1.6 Å resolution crystal structure (NDB file UR0004) of...

   • Sequence-Dependence of The Energetics of Opening of at Basepairs in DNA

     The reduced twist is coupled with base-pair roll at each...

   • Protein-DNA Interactions

     Since the first structure of a DNA molecule from a single...

   • Quantitative Analysis of Nucleic Acid Three-Dimensional Structures

     Introduction. The function of ribonucleic acid (RNA)...

2. rnajournal.cshlp.org › content › 7/4/499Geometric nomenclature and classification of RNA base pairs

   rnajournal.cshlp.org › content › 7/4/499

   base pair geometries are listed in Table 1, with the local strand orientations in the default anticonfigurations of the bases with respect to the sugars+ Examples taken

3. www.researchgate.net › publication › 51769880_Comprehensive_survey_and_geometric(PDF) Comprehensive survey and geometric classification of base...

   www.researchgate.net › publication › 51769880_Comprehensive_survey_and_geometric

   3 Νοε 2011 · Summary of Leontis/Westhof base pairing classification. (A) Each unmodified RNA nucleotide presents three edges for base pairing interactions, the Hoogsteen (H), Watson–Crick (W) and...

4. www.researchgate.net › publication › 225504717_Base_pairing_in_RNA_structures_A(PDF) Base pairing in RNA structures: A computational analysis of...

   www.researchgate.net › publication › 225504717_Base_pairing_in_RNA_structures_A

   1 Σεπ 2008 · The base pairing patterns in RNA structures are more versatile and completely different as compared to DNA. We present here results of ab-initio studies of structures and interaction...

5. www.semanticscholar.org › paper › Geometric-nomenclature-and-classification-of-RNAGeometric nomenclature and classification of RNA base pairs.

   www.semanticscholar.org › paper › Geometric-nomenclature-and-classification-of-RNA

   1 Απρ 2001 · Non-Watson-Crick base pairs mediate specific interactions responsible for RNA-RNA self-assembly and RNA-protein recognition. An unambiguous and descriptive nomenclature with well-defined and nonoverlapping parameters is needed to communicate concisely structural information about RNA base pairs.

6. cshperspectives.cshlp.org › content › 10The RNA Base-Pairing Problem and Base- Pairing Solutions - CSHL P

   cshperspectives.cshlp.org › content › 10

   Here we review progress in RNA structure analysis, focusing on methods that use the “cross-link, proximally ligate, and sequence principle for high-throughput ” detec-tion of base-pairing interactions in living cells.

7. www.researchgate.net › publication › 279299679(PDF) An Atlas of RNA Base Pairs Involving Modified Nucleobases...

   www.researchgate.net › publication › 279299679

   27 Ιουν 2015 · Herein we present a systematic investigation of modified base pairs, in the context of experimental RNA structures. To this end, we first compiled an atlas of experimentally observed modified...