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The SCOP database, created by manual inspection and abetted by a battery of automated methods, aims to provide a detailed and comprehensive description of the structural and evolutionary relationships between all proteins whose structure is known.
The most widely used and comprehensive databases are SCOP, CATH and FSSP, which represent three unique methods of classifying protein structures: purely manual, a combination of manual and automated, and purely automated, respectively.
17 Απρ 2009 · We create a new mapping between SCOP and CATH and define a consistent benchmark set which is shown to largely reduce errors made by structure comparison methods such as TM-Align and has useful further applications, e.g. for machine learning methods being trained for protein structure classification.
15 Σεπ 1999 · The most widely used and comprehensive databases are SCOP, CATH and FSSP, which represent three unique methods of classifying protein structures: purely manual, a combination of manual and automated, and purely automated, respectively.
The SCOP representative domain page shows the details of its sequence and structure. A sequence viewer allows to allocate the SCOP domain on the entire UniProtKB protein sequence as well as to retrieve all domains for this protein, classified in SCOP.
14 Νοε 2019 · The Structural Classification of Proteins (SCOP) database is a classification of protein domains organised according to their evolutionary and structural relationships. We...
1 Ιουλ 2003 · We examine the structural and functional classifications of the protein universe, providing an overview of the existing classification schemes, their features and inter-relationships.
