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  1. The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences. The program compares nucleotide or protein sequences to sequence databases and calculates the statistical significance of matches.

    • Blast

      The Basic Local Alignment Search Tool (BLAST) finds regions...

    • Home

      The Basic Local Alignment Search Tool (BLAST) finds regions...

    • Recent Results

      This page provides links to your unexpired BLAST jobs. Enter...

    • Saved Strategies

      The core nucleotide database (core_nt) is now the default...

    • Help

      Welcome to BLAST Help¶ Getting started¶ Web BLAST quick...

    • Nucleotide Blast

      PSI-BLAST allows the user to build a PSSM (position-specific...

    • Blastx

      PSI-BLAST allows the user to build a PSSM (position-specific...

    • Smart Blast

      Smart BLAST. blastp. Smart Blast searches a protein query...

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  3. Nucleotide BLAST allows you to search nucleotide databases using a nucleotide query. You can choose from different BLAST algorithms, databases, organisms, and parameters to optimize your search.

  4. In bioinformatics, BLAST (basic local alignment search tool) [3] is an algorithm and program for comparing primary biological sequence information, such as the amino-acid sequences of proteins or the nucleotides of DNA and/or RNA sequences.

  5. 3 Αυγ 2023 · BLAST stands for Basic Local Alignment Search Tool. It is a widely used bioinformatics program that was first introduced by Stephen Altschul et al. in 1990 and has since become one of the most popular tools for sequence similarity search.

  6. blast.ncbi.nlm.nih.gov › smartblastSmart BLAST

    Smart BLAST. blastp. Smart Blast searches a protein query against the landmark database. Enter Protein Query Sequence. Enter one protein accession, gi, or FASTA sequence [?] Clear. Enter query sequence in the text area. It automatically determines the format of the input.

  7. 23 Ιουν 2008 · This manual documents the BLAST (Basic Local Alignment Search Tool) command line applications developed at the National Center for Biotechnology Information (NCBI).

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